Managing SCN for 2020 Should Begin Now

November 5, 2019
ICM News

Now that the 2019 corn and soybean harvest is in full swing, it is not too early to start thinking about and planning for the 2020 growing season as well. For soybean farmers in Iowa, a critically important fall activity that can pay large dividends is soil sampling to determine soybean cyst nematode (SCN) population densities in fields in which soybeans will be grown in 2020. Also, some farmers might consider sampling fields for SCN in which soybeans were grown in 2019 that produced disappointing yields for no apparent reason. Often, SCN infestations are found in areas of fields in which soybean yields were inexplicably low.

The need for knowing your fields’ SCN numbers is because although SCN had been kept pretty much “in check” for decades with SCN-resistant soybean varieties, almost all of those varieties had the same source of SCN resistance genes - from a breeding line called PI 88788. And using the same resistance genes for 20+ years has led to the buildup of SCN populations with increased reproduction on resistant soybean varieties. The SCN populations in a majority of fields infested with the nematode in Iowa have relatively high levels of reproduction on soybean varieties with the common PI 88788 SCN resistance. Populations of SCN that used to reproduce at a level of 5% to 10% now are reproducing at levels of 50% or 60% or more. Put simply, many (most?) SCN-resistant soybean varieties are not as effective of a management tool as they used to be.

Need to know your numbers

So now more than ever, farmers need to know if their fields are infested with SCN and what the numbers are. The higher the number of SCN eggs in the soil, the greater the yield loss - even with resistant soybean varieties

SCN is a consistent soybean yield reducer every year, not a “hit or miss” issue depending on the weather as is the case with many pathogens and pests. The nematode survives very well in the soil, even through a few years of nonhost corn, and SCN will reduce yields every year that soybeans are grown in infested fields, regardless of weather.

Fall is an opportune time to sample for SCN

It is relatively easy to determine SCN numbers in fields. All it takes is collecting a soil sample to be tested for the nematode. And fall is a prime time to collect samples from fields.

Sampling guidelines:

  • It is best to use a soil probe, not a spade, to collect soil cores, and cores should be about 8 inches deep.
  • The more soil cores collected from the smaller the area, the more accurate the results will be. Collecting 15 to 20 soil cores from every 20 acres often is recommended.
  • Collect soil cores from agronomically logical areas (management zones) in the fields. See figure below.
  • Combine all soil cores that represent a sampling area in a bucket and mix well, then place the mixed soil into a soil sample bag or some other water-resistant bag.
  • SCN samples can be submitted to Iowa State’s Plant and Insect Diagnostic Clinic, room 2445 Advanced Teaching and Research Building, 2213 Pammel Drive, Ames, IA 50011, 515-294-0581, More information is available online here.
  • Many private soil-testing labs also can process samples for SCN. Information about private SCN labs in Iowa or any other state is available online here.

sampling map
Figure: Example sampling pattern in a field with different management zones. Each “x” represents the location from which a soil core was collected.

What do SCN sample numbers mean?

The egg counts that correspond to risks of low, medium, and high yield loss in Iowa based on SCN numbers from the ISU Plant and Insect Diagnostic Clinic are shown below. The numbers are estimates; actual severity of yield loss is greatly affected by in-season temperatures and rainfall. Also, there is no one standard extraction method used to process soil samples for SCN; a few different methods are used throughout the US and Canada. Different extraction methods can be more or less effective at recovering SCN cysts and eggs from the soil. So, categories of egg counts corresponding to yield loss severity likely will vary among different laboratories.

eggcount categories table
Table: Magnitude of possible soybean yield losses corresponding to SCN soil sample egg count results from the Iowa State University Plant and Insect Diagnostic Clinic. 

More information about SCN

For more information about the biology and management of SCN, visit, and


Links to this article are strongly encouraged, and this article may be republished without further permission if published as written and if credit is given to the author, Integrated Crop Management News, and Iowa State University Extension and Outreach. If this article is to be used in any other manner, permission from the author is required. This article was originally published on November 5, 2019. The information contained within may not be the most current and accurate depending on when it is accessed.


Greg Tylka Morrill Professor

Dr. Greg Tylka is a Morrill Professor in the Department of Plant Pathology and Microbiology at Iowa State University with extension and research responsibilities for management of plant-parasitic nematodes. The focus of Dr. Tylka's research program at Iowa State University is primarily the soybea...